CDS

Accession Number TCMCG016C11877
gbkey CDS
Protein Id OMO80940.1
Location complement(join(34396..34590,34704..34876,36113..36193,36286..36548,37085..37159,37265..37363,37684..37799,37939..38101,38562..38764,38875..39012,39140..39226,39393..39465,40797..40991,41709..41785,42030..42101,42713..42873,42970..43156,43234..43353,43462..43545,43634..43827,44066..44233,44378..44608,44730..44817,44909..45070,45909..46010))
Organism Corchorus capsularis
locus_tag CCACVL1_12689

Protein

Length 1168aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01010235.1
Definition Zinc finger, RING-type [Corchorus capsularis]
Locus_tag CCACVL1_12689

EGGNOG-MAPPER Annotation

COG_category O
Description E3 ubiquitin-protein ligase BRE1-like
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K10696        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006513        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006955        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009965        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010016        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010162        [VIEW IN EMBL-EBI]
GO:0010228        [VIEW IN EMBL-EBI]
GO:0010390        [VIEW IN EMBL-EBI]
GO:0010431        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016574        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0021700        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022611        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032504        [VIEW IN EMBL-EBI]
GO:0033523        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0042803        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045087        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048366        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048609        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071695        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAAAGCTCAGAATCGGACGAACCAGAGAAGAAGAGGCCGCATTTGGATTCTCCCACCATGGCCCGTAACTCTTCAACTTCTCCCAACCATGCCAACGCTGTTGACGCTGCAGTTCTCCAGTACCAGAATCAAAAACTCGTCCAGCAATTAGATGTTCAGAAACATGAGTTGCATGATCTTGAAACCAAAATTAAAGAGTTAAAACACAGGCAAAGCTCTTATGATGATATGTTGATAAGTTTGAATCAACTATGGAATCAGTTGGTTGATGATTTGATCCTCCTTGGTGTACGAGCTGGAGGAGGCCATAATGCTTTAGAAACCTTGGACCGTGGAGACACTTCGCGAGATTCTATTCCATCATGCCCTGTGGAGGAGATGTTTCTCTGTAGGCTTCTAGAAAGAGATTCTATTGACTGTAGTGACAATGATGCAATTGCAAATTATGTTGAACAAGTCCTATCTTCTCGTCATTCATCCACTATGGAGTTGATAAAATCTCTAGAGGATACAATTGCTGCTGAGAGTGTGAAAACTGAGAGCATGGCTCTTGCTTTGCAGGGAAATATATCTGCTGAAGACAACATCATGCAGCTATCCAAGATTGATGATATGATGAAAGAGGAGGCTAAGAACTTTCGTGACGTTATTGACGCTCTACACTTGAAGCATAAAGAATATACTGATAGGATTCAAATATATATAAGCAGCCATTCAACTGACGAATCTGAGATTAAACGTCTTCAAGGTGACCTGGAAGAGATTATGGCTGAACTTGAACAAAGCAGAAGAAAATTAGTTAATCTGAGAATGCAGAAGAATGTAGCGTCTGGGATGCATGCACCTACTCAAGTTGCCGCAAATGGCACCTTGTCACCGGAGAAGACTGCAGATAAAACAAGGGGCTTGCGGGAGATAAAGGATTCAATTGAGGAGGCAAAGACAGTGGCAGAAGATCGACTTAAAGAACTTCAAGATGCACTGCAGCAGAACCTAATCTATTCAAAACAATTACAGGATCTTCAGAATGAACTGAAGGATGACAAATTTGTACAATCGTCTCGACTGTACACTTTGTTAAGTGATCAACTCCAGCATTGGAATGCTGAACTGGGACAATACAAAGCACTCACTGATACTCTGCAGACTGACAGGTTTCTTGTCACGAGGAGGGAGAAGGAACTGAATCTAAAAGCTGAGTCAGCTGATGCTGCAAGAAATACAATTGATAATGCTGATACTAAAATTGAAGATGTGGAGTTGCAGCTCCAAAAGTGTATCATAGAAAAAAATGATCTTGAGATTAAAATGGAAGAAGCTATGCAGGATGCAGGGCGAAATGACATTAAAGCCGAATTTCGTGTAATGGCGTCGGCTCTGTCCAAGGAAATGGGAATGATGGAAGCTCAGTTGAATCGCTGGAAGGAGACTGCGCATGAAGCAATTTCCTTACGGAAAGAAACTGAGTCGTTAAAAGCTTTGTTAAGTGATAAGACAAATCAACAAAAGCGCTTAGCAGACGAATGTGCTGAACAGATTGTGGAAATCAAATCTCTTAAGGGTCTGATTGAGAAATTGCAGAAGGAAAAATTGGAGCTGCAAAATTTCTTGGACGTGTATGGCCAAGAAGGCTATGATAACAGAGAAGTCACTGAAATAAGAGAATCAGAAAATAGAGCTCATCTACAAGCTGAAGTCTTGAAAAATGCTTTAGATGAACATAGTCTGGAACTAAGAGTGAAGGCTGCCAATGAGGCGGAGGCTGCTTGTCAAGAAAGGCTTTCTGTTGCTGAAGCTGAAATAGCTGAGTTAAGAGCTAAACTTGATGCTTCTGAGAGGGATGTTTTGGAGCTCACAGAGGCTATTAAAAGTAAAGATCGAGAGTCAGAGACATACATTTCTGAAATTGAGACTATTGGCCAGGCATATGAAGATATGCAGACACAGAACCAGCATCTGTTGCATCAGATGACAGAAAGGGATGATTACAATATTAAGCTTGTCTCTGAGAGTGTAAAGACAAAGCAGGCATATAATTTATTTCTCTCTGAGAAGCAGACATTGGCAAAGCAACTTCAGCAGGTCAATTCATCAATTGAATCAGTAAAAATGAGGATTGTACACAATGAGGAACAGATCAAAGTTTGTTTGACTGATGCTATTAAATCTACCCAAGAGGACAGACATGTTGTGATAAGTCTTGAAACTGCAAAGTGGGAGTTGGCAGATGCCGAGAAGGAATTGAAGTGGCTTAAATCTGCTGCAACATCTTCTGAGAAGGACCATGAGCAGCTCCAGCGGAAGGTGGATGAACTCCAAGTGAAGTTGGATAAGGAGCGAAGCCAAAGGAAGAAGCTTGAGGAAGAGCTTACGGAACTAAATAGCAAGGCTGCTGAGCTGAGTTCTGAAACTGGAGAGACGGCAATACGGAAGCTCCAGGATGAAATAAAAAATTGCAAGAATATTCTAAAATGTGGTGTGTGTTTTGACCGGCCAAAGGAGGTTGTAATTGTCAAATGCTATCATCTATTTTGCAATCCATGTATACAGAGAAATTTAGAGATACGACATCGAAAATGCCCTGGTTGTGGAACTGCATTTGGTCAGAATGATGTTAGATATGATTCTAAGCACTCTCAAGGCTCCCTCATCATCTTGAGAGTATTGAACCAAATACTAATACAGGTTGGATCAAGTGGTAAGAGGTTTGTTATAGCGTATCATCGAGTTTTATCGGAGATTGATGGTCGGAAGCGAGTTTTATCGGAGATTGATGGTTGGAAGCATGAAAGCTTCATTTCATCATCTTTCCACACCAACTCAAACCCTACAAAATCTTCATTTTTGCTGCCCAAAACCCTTCTTCCAGTTTTCACTACTGAACCCACCAGCAAGAGCAAAAGTTTAATCCATCTGTCACCAAGGAAAAGGAATGCTGCTGGGATTCGTGTGTCCTTGCTTGAAGCTCCAGTGCTTTGGGCTGGTAGGCTTTGCATTTACTATGCACTCTTGAAGGCTGGTTTAGCTGGATCTCAATCTAACCCTCTTGTCTCAGAGCTGGAGAGTGGAGTTGGAATTGGTGAGTCAGGTGATTTGGGGTTCTCTAAGTGGTTGGAGAATATTCAAGGGAAACCAGACAAGGAAGCAGCCGACAAAAGAAAGTTGGTCAGTAAATGGCATCCCACCACGAAAGGCACACTCAAAAGGAACTACAGGGTGCCATCTAAATCAGAAGGCAGGCGGCTACTTAAAGCAGTTGCATCCTTACTGTCAGATGATGACCATTTTACTGATGCCACTTCCCACAAGGGTTGTCAGATCAGGAGGGAGAGTGCTCACGGTGAAAGTGTCTGCTGCAACAATGTAAGAGCTCTGTTTGATGAGCTTCCTACTCCTCACCTTATAGTGGAAATTACGCCATTTCCAGCAGGGCCTCTCACTGAAAAAGATTACATCAAAGCTGAGAAACTGGAGAGGGTTCTACGATCCGGTCCTTCTGTTTAA
Protein:  
MESSESDEPEKKRPHLDSPTMARNSSTSPNHANAVDAAVLQYQNQKLVQQLDVQKHELHDLETKIKELKHRQSSYDDMLISLNQLWNQLVDDLILLGVRAGGGHNALETLDRGDTSRDSIPSCPVEEMFLCRLLERDSIDCSDNDAIANYVEQVLSSRHSSTMELIKSLEDTIAAESVKTESMALALQGNISAEDNIMQLSKIDDMMKEEAKNFRDVIDALHLKHKEYTDRIQIYISSHSTDESEIKRLQGDLEEIMAELEQSRRKLVNLRMQKNVASGMHAPTQVAANGTLSPEKTADKTRGLREIKDSIEEAKTVAEDRLKELQDALQQNLIYSKQLQDLQNELKDDKFVQSSRLYTLLSDQLQHWNAELGQYKALTDTLQTDRFLVTRREKELNLKAESADAARNTIDNADTKIEDVELQLQKCIIEKNDLEIKMEEAMQDAGRNDIKAEFRVMASALSKEMGMMEAQLNRWKETAHEAISLRKETESLKALLSDKTNQQKRLADECAEQIVEIKSLKGLIEKLQKEKLELQNFLDVYGQEGYDNREVTEIRESENRAHLQAEVLKNALDEHSLELRVKAANEAEAACQERLSVAEAEIAELRAKLDASERDVLELTEAIKSKDRESETYISEIETIGQAYEDMQTQNQHLLHQMTERDDYNIKLVSESVKTKQAYNLFLSEKQTLAKQLQQVNSSIESVKMRIVHNEEQIKVCLTDAIKSTQEDRHVVISLETAKWELADAEKELKWLKSAATSSEKDHEQLQRKVDELQVKLDKERSQRKKLEEELTELNSKAAELSSETGETAIRKLQDEIKNCKNILKCGVCFDRPKEVVIVKCYHLFCNPCIQRNLEIRHRKCPGCGTAFGQNDVRYDSKHSQGSLIILRVLNQILIQVGSSGKRFVIAYHRVLSEIDGRKRVLSEIDGWKHESFISSSFHTNSNPTKSSFLLPKTLLPVFTTEPTSKSKSLIHLSPRKRNAAGIRVSLLEAPVLWAGRLCIYYALLKAGLAGSQSNPLVSELESGVGIGESGDLGFSKWLENIQGKPDKEAADKRKLVSKWHPTTKGTLKRNYRVPSKSEGRRLLKAVASLLSDDDHFTDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLTEKDYIKAEKLERVLRSGPSV